The Geometry of Meaning in Neural Manifolds
Neural networks trained independently on similar tasks often learn compatible semantic structure but express it through incompatible coordinate systems. This doctoral thesis proposes that semantic correspondence—identifying which elements refer to the same meaning across systems—is a fundamental primitive for revealing shared intrinsic geometry. It unifies fourteen methods spanning vision, language, reinforcement learning, and neuroscience under a single framework, distinguishing correspondence-parallel operators (independent semantic projections) from correspondence-coupled operators (direct cross-model maps). The work enables zero-shot transformation and model stitching without joint training, yet explicitly disclaims formal theoretical guarantees, positioning itself as a systematic empirical demonstration.
The thesis delivers an ambitious, well-written unification of representation alignment under a geometric correspondence framework. Its taxonomy of parallel and coupled operators is conceptually clean, and the breadth of domains and architectures is impressive. However, the author candidly admits that the framework rests on empirical validation rather than formal proof: "This thesis does not provide formal sufficiency conditions guaranteeing when correspondence will reveal alignable structure." Because intrinsic geometric convergence is treated as an observed phenomenon rather than a derived one, the generalization of the "correspondence principle" to all learning systems—including human brains—remains suggestive but technically unsupported.
The strongest aspect is the elegant simplicity of the foundational method, relative representations, which projects embeddings onto cosine similarities with shared anchors to produce invariant semantic coordinates. As the author notes, this requires "no optimization, no learned parameters, no iterative refinement—just matrix multiplication computing cosine similarities." The empirical scope is also notable: the same principle is shown to support angular, metric, spectral, sparse, and distributional alignments across CNNs, Transformers, graph networks, and even fMRI recordings. The consistent operator taxonomy provides a useful conceptual scaffold for what would otherwise appear as a disparate collection of tricks.
The central limitation is the lack of theoretical grounding for when and why intrinsic geometries converge. The author states plainly that "we cannot predict a priori whether two given models will have sufficiently similar intrinsic geometry for correspondence to enable useful transformation." Without sufficiency conditions, the framework risks being unfalsifiable: if alignment fails, one can always blame insufficient correspondence or violated geometric assumptions, while success is taken as evidence of a "fundamental primitive." Furthermore, claims that the principle extends to biological neural systems rely on a single fMRI application and conflate very different measurement modalities and learning regimes. The heavy reliance on the author’s own prior publications as evidence also raises the risk of confirmation bias, since negative results across unrelated architectures may not be reported.
The thesis situates its contribution fairly against transfer learning, Procrustes analysis, model stitching, and kernel similarity measures, correctly noting that "Zero-shot transformation across independently trained models with arbitrary architectures remained an open challenge." The evidence draws extensively on the representation similarity puzzle—e.g., "different optimization trajectories reach functionally similar solutions in distinct regions of parameter space"—to motivate the need for coordinate-invariant methods. However, the comparison is largely narrative rather than quantitative head-to-head; benchmarks against contemporary baselines are distributed across prior publications rather than aggregated in a single reproducible protocol. The claim that the framework accommodates "arbitrary architectures" is empirically supported mainly by pairwise demonstrations rather than by a systematic ablation over architecture divergence.
Reproducibility is mixed. The thesis benefits from precise mathematical notation and explicit definitions of operators such as $T_{\Gamma}:\mathcal{X}\to\mathcal{Y}$. Some methods link to public code; for example, relative representations are accompanied by "Code: https://github.com/lucmos/relreps." Yet because the thesis synthesizes fourteen distinct publications, replicating the full sweep would require reconstructing disparate codebases, datasets, and hyperparameters. Key details such as exact anchor counts, training budgets, and random seeds are often deferred to appendices of prior papers. The author advocates consistent empirical methodology, stating that each method chapter follows "stating correspondence assumptions explicitly, validating those assumptions on real problems with authentic experimental results," but a unified benchmark suite or standard training protocol is absent, which would be essential for independent verification.
Just as different languages express the same concept through different words, neural networks express similar functions through incompatible coordinate systems. Different architectures, random initializations, and optimization trajectories produce incompatible parameterizations in extrinsic coordinates, obscuring functional relationships between independently trained models. When models independently solve similar tasks on related data, do their learned representations share exploitable structure despite incompatible coordinates? This thesis shows that semantic correspondence is a fundamental primitive revealing shared geometric structure beneath incompatible parameterizations. By identifying which elements refer to the same semantic content, correspondence breaks the symmetry of arbitrary implementation choices, anchoring incompatible systems to a shared semantic frame and revealing the intrinsic geometry that enables zero-shot transformation between independently trained models. Building on this principle, fourteen contributions explore correspondence-based alignment across zero-shot model stitching, cross-modal translation, policy transfer, activation steering, and neural decoding. They span domains (vision, language, reinforcement learning, neuroscience), architectures (CNNs, Transformers, graph networks), and scales (from small supervised models to billion-parameter generative systems). Each exploits different geometric properties (angular, metric, spectral, sparse, or distributional), yet all instantiate the same principle. It extends beyond artificial systems: fMRI data show that different human brains processing identical stimuli exhibit alignable geometric structure. By revealing intrinsic geometric structure beneath extrinsic parameterization, semantic correspondence transforms model isolation into interoperability.
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